Course format:
- Self-study course.
- On-demand access to all video content online within a 12-month period.
- Daily interaction on the Discussion Board for detailed questions.
- Live chat for quick queries.
- Course fee includes a 1-hour video chat with instructors for personalized questions and data assistance.
Key components:
- Analysis of count data, continuous data, and proportional data with an excessive number of zeros.
- Applying zero-inflated Poisson, negative binomial, generalised Poisson, binomial, and beta GLMs and GLMMs using glmmTMB.
- Applying Tweedie GLM(M)s and hurdle models using glmmTMB.
- Bonus material: If we were to design a similar field study or experiment, how many clusters, and how many observations per cluster should we sample?
Detailed outline:
Module 1
- General introduction.
- Short revision of data exploration and linear regression in R.
- Introduction to matrix notation.
- Revision Poisson GLM for the analysis of count data.
- Introducing the negative binomial, generalised Poisson, and Conway-Maxwell-Poisson GLMs for the analysis of count data.
- Model validation using DHARMa.
Module 2
- Theory presentation on zero-inflated models.
- Three exercises using the zero-inflated GLMs for the analysis of data sets with an excessive number of zeros in the count data.
Module 3
- Theory presentation on hurdle models for the analysis of zero-inflated count data. This presentation also covers zero-truncated models.
- One exercise using zero-altered Poisson and zero-altered negative binomial models for the analysis of count data with an excessive number of zeros.
- Theory presentation on the GLM with the Tweedie distribution.
- Application of a Tweedie GLM on zero-inflated continuous data. We will also explain the zero-altered Gamma model.
Module 4
- Revision of linear mixed-effects models.
- Exercise on linear mixed-effects models.
- Exercise using a zero-inflated Poisson GLMM to analyse count data.
- Exercise using a zero-inflated negative binomial GLMM to analyse count data.
Module 5
- Exercise using a zero-inflated binomial GLMM to analyse proportional data.
- Exercise using a zero-inflated beta GLMM to analyse proportional.
- Exercise using a Tweedie GLMM and a zero-altered Gamma GLMM to analyse continuous data with an excessive number of zeros.
Module 6
- If we were to design a similar field study or experiment, how many clusters, and how many observations per cluster should we sample?
Pre-required knowledge:
Working knowledge of R, data exploration, linear regression and GLM (Poisson and Bernoulli). This is a non-technical course. Short revisions are provided.